PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19717
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 255aa    MW: 28838.3 Da    PI: 10.6786
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19717genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.7e-11250455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +h  +Er+RR+++N+ +  Lr+l P     + k+ + a+i   A+e+Ik++q
  PEQU_19717  2 SHITVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGAIEFIKEMQ 50
                7999**********************9...9*******************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.79E-11154No hitNo description
PROSITE profilePS5088814.316149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-11261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-15266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-8250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-10455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MSHITVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GAIEFIKEMQ QLLHSLESKK  60
KRKCLSPSPS PSPRPSILSL TSPPPLASSS PNFEVVKELS ACCNSSVADV EAKISGSNVI  120
LKTLSKSIPG QMVKIITVLE RLGFEILHLS ISSMEDTVLY SFVIKVIITF SFFLLRINLC  180
LNDLSFHLLK LTTHLRQLIW CGGILKTHLF CLGKLRFGSL FVFKTLKIVF SHRTYLGAVT  240
TFWLRSDFSL KKKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012484181.11e-77PREDICTED: transcription factor MUTE
SwissprotQ9M8K67e-68MUTE_ARATH; Transcription factor MUTE
TrEMBLA0A0D2Q3R93e-78A0A0D2Q3R9_G
STRINGGSMUA_Achr7P21110_0012e-76(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111443441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-64bHLH family protein